Cluster: CGMR017525_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_00090
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50542 | k141_50542_2 | 727 | 2124 | - | 4.A.1.2.9 |
| CAZyme | k141_50542 | k141_50542_3 | 2220 | 3611 | - | GH32 |
| NULL(UNKNOWN) | k141_50542 | k141_50542_4 | 3560 | 3664 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_50542 | k141_50542_5 | 3738 | 4589 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_50542 | k141_50542_6 | 4573 | 6516 | - | GH13_9 |
Gene ID: k141_50542_2
Type: TC
Location: 727 - 2124 (-)
Type: TC
Location: 727 - 2124 (-)
Gene ID: k141_50542_3
Type: CAZyme
Location: 2220 - 3611 (-)
Type: CAZyme
Location: 2220 - 3611 (-)
Gene ID: k141_50542_4
Type:
Location: 3560 - 3664 (-)
Type:
Location: 3560 - 3664 (-)
Gene ID: k141_50542_5
Type: TF
Location: 3738 - 4589 (+)
Type: TF
Location: 3738 - 4589 (+)
Gene ID: k141_50542_6
Type: CAZyme
Location: 4573 - 6516 (-)
Type: CAZyme
Location: 4573 - 6516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.