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Cluster: CGMR017525_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_35070 k141_35070_9 9114 12209 + GH2
CAZyme k141_35070 k141_35070_10 12264 14315 + GH42
pfam k141_35070 k141_35070_11 14388 15503 + Radical_SAM | SPASM
CAZyme k141_35070 k141_35070_12 15569 16927 - GH29
TC k141_35070 k141_35070_13 17013 18797 - 9.B.33.1.1
TF k141_35070 k141_35070_14 18794 19888 - HTH_AraC | HTH_AraC
TC k141_35070 k141_35070_15 20119 21075 + 3.A.1.1.10
TC k141_35070 k141_35070_16 21091 22026 + 3.A.1.1.29
Gene ID: k141_35070_9
Type: CAZyme
Location: 9114 - 12209 (+)
Gene ID: k141_35070_10
Type: CAZyme
Location: 12264 - 14315 (+)
Gene ID: k141_35070_11
Type: pfam
Location: 14388 - 15503 (+)
Gene ID: k141_35070_12
Type: CAZyme
Location: 15569 - 16927 (-)
Gene ID: k141_35070_13
Type: TC
Location: 17013 - 18797 (-)
Gene ID: k141_35070_14
Type: TF
Location: 18794 - 19888 (-)
Gene ID: k141_35070_15
Type: TC
Location: 20119 - 21075 (+)
Gene ID: k141_35070_16
Type: TC
Location: 21091 - 22026 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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