Cluster: CGMR017525_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_11285 | k141_11285_1 | 2 | 1387 | + | GH73 |
| pfam | k141_11285 | k141_11285_2 | 1609 | 3471 | + | DUF975 | ABC_trans_CmpB |
| TF | k141_11285 | k141_11285_3 | 3410 | 4177 | - | GntR |
| TC | k141_11285 | k141_11285_4 | 4404 | 6437 | + | 4.A.1.2.13 |
| CAZyme | k141_11285 | k141_11285_5 | 6476 | 8140 | + | GH13_29 |
Gene ID: k141_11285_1
Type: CAZyme
Location: 2 - 1387 (+)
Type: CAZyme
Location: 2 - 1387 (+)
Gene ID: k141_11285_2
Type: pfam
Location: 1609 - 3471 (+)
Type: pfam
Location: 1609 - 3471 (+)
Gene ID: k141_11285_3
Type: TF
Location: 3410 - 4177 (-)
Type: TF
Location: 3410 - 4177 (-)
Gene ID: k141_11285_4
Type: TC
Location: 4404 - 6437 (+)
Type: TC
Location: 4404 - 6437 (+)
Gene ID: k141_11285_5
Type: CAZyme
Location: 6476 - 8140 (+)
Type: CAZyme
Location: 6476 - 8140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.