Cluster: CGMR017525_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_01670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_51289 | k141_51289_4 | 2801 | 4084 | + | 3.A.1.1.28 |
| TC | k141_51289 | k141_51289_5 | 4105 | 4986 | + | 3.A.1.1.28 |
| TC | k141_51289 | k141_51289_6 | 4988 | 5827 | + | 3.A.1.1.28 |
| TC | k141_51289 | k141_51289_7 | 6005 | 7861 | + | 8.A.59.2.1 |
| TF | k141_51289 | k141_51289_8 | 7839 | 9386 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_51289 | k141_51289_9 | 9379 | 10764 | + | GH32 |
Gene ID: k141_51289_4
Type: TC
Location: 2801 - 4084 (+)
Type: TC
Location: 2801 - 4084 (+)
Gene ID: k141_51289_5
Type: TC
Location: 4105 - 4986 (+)
Type: TC
Location: 4105 - 4986 (+)
Gene ID: k141_51289_6
Type: TC
Location: 4988 - 5827 (+)
Type: TC
Location: 4988 - 5827 (+)
Gene ID: k141_51289_7
Type: TC
Location: 6005 - 7861 (+)
Type: TC
Location: 6005 - 7861 (+)
Gene ID: k141_51289_8
Type: TF
Location: 7839 - 9386 (+)
Type: TF
Location: 7839 - 9386 (+)
Gene ID: k141_51289_9
Type: CAZyme
Location: 9379 - 10764 (+)
Type: CAZyme
Location: 9379 - 10764 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.