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Cluster: CGMR017525_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55770 k141_55770_22 21236 22003 + 8.A.3.2.3
TC k141_55770 k141_55770_23 22017 22700 + 8.A.3.2.3
pfam k141_55770 k141_55770_24 22752 24245 + LytR_cpsA_psr
TC k141_55770 k141_55770_25 24322 25764 + 9.B.18.1.2
pfam k141_55770 k141_55770_26 25793 26689 + NTP_transferase | NTP_transf_3
CAZyme k141_55770 k141_55770_27 26874 28115 + GT4
CAZyme k141_55770 k141_55770_28 28112 29458 + GT4
pfam k141_55770 k141_55770_29 29474 30172 + Hexapep | Hexapep_2 | Hexapep_2
CAZyme k141_55770 k141_55770_30 30568 31494 + GT2
NULL(UNKNOWN) k141_55770 k141_55770_31 31539 32678 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_55770 k141_55770_32 32650 33519 + GT32
CAZyme k141_55770 k141_55770_33 33516 34427 + GT2
Gene ID: k141_55770_22
Type: TC
Location: 21236 - 22003 (+)
Gene ID: k141_55770_23
Type: TC
Location: 22017 - 22700 (+)
Gene ID: k141_55770_24
Type: pfam
Location: 22752 - 24245 (+)
Gene ID: k141_55770_25
Type: TC
Location: 24322 - 25764 (+)
Gene ID: k141_55770_26
Type: pfam
Location: 25793 - 26689 (+)
Gene ID: k141_55770_27
Type: CAZyme
Location: 26874 - 28115 (+)
Gene ID: k141_55770_28
Type: CAZyme
Location: 28112 - 29458 (+)
Gene ID: k141_55770_29
Type: pfam
Location: 29474 - 30172 (+)
Gene ID: k141_55770_30
Type: CAZyme
Location: 30568 - 31494 (+)
Gene ID: k141_55770_31
Type:
Location: 31539 - 32678 (+)
Gene ID: k141_55770_32
Type: CAZyme
Location: 32650 - 33519 (+)
Gene ID: k141_55770_33
Type: CAZyme
Location: 33516 - 34427 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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