Cluster: CGMR017525_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR017525
- CGC Family ID: CGCFAM_05420
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50739 | k141_50739_3 | 1973 | 3211 | + | 1.A.11.1.4 |
| pfam | k141_50739 | k141_50739_4 | 3256 | 3612 | + | P-II |
| pfam | k141_50739 | k141_50739_5 | 3721 | 4893 | - | CbiG_C | CbiG_N | CbiG_mid |
| CAZyme | k141_50739 | k141_50739_6 | 5019 | 6131 | - | GH18 |
| TC | k141_50739 | k141_50739_7 | 6345 | 8165 | - | 3.A.1.135.9 |
| TC | k141_50739 | k141_50739_8 | 8152 | 9897 | - | 3.A.1.135.9 |
Gene ID: k141_50739_3
Type: TC
Location: 1973 - 3211 (+)
Type: TC
Location: 1973 - 3211 (+)
Gene ID: k141_50739_4
Type: pfam
Location: 3256 - 3612 (+)
Type: pfam
Location: 3256 - 3612 (+)
Gene ID: k141_50739_5
Type: pfam
Location: 3721 - 4893 (-)
Type: pfam
Location: 3721 - 4893 (-)
Gene ID: k141_50739_6
Type: CAZyme
Location: 5019 - 6131 (-)
Type: CAZyme
Location: 5019 - 6131 (-)
Gene ID: k141_50739_7
Type: TC
Location: 6345 - 8165 (-)
Type: TC
Location: 6345 - 8165 (-)
Gene ID: k141_50739_8
Type: TC
Location: 8152 - 9897 (-)
Type: TC
Location: 8152 - 9897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.