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Cluster: CGMR017525_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_10982 k141_10982_15 13230 15692 + GH39
pfam k141_10982 k141_10982_16 15884 17077 + Sugar_tr | MFS_1 | MFS_1
CAZyme k141_10982 k141_10982_17 17067 19472 + GH39
pfam k141_10982 k141_10982_18 19707 20669 + FMN_red
TC k141_10982 k141_10982_19 20697 22013 + 2.A.2.3.2
TF k141_10982 k141_10982_20 22285 23061 + HTH_6
pfam k141_10982 k141_10982_21 23237 24022 + AP_endonuc_2
CAZyme k141_10982 k141_10982_22 24061 25125 + GH179
pfam k141_10982 k141_10982_23 25521 26441 + AP_endonuc_2
CAZyme k141_10982 k141_10982_24 26493 27605 + GH179
pfam k141_10982 k141_10982_25 27714 28109 + CGDB
pfam k141_10982 k141_10982_26 28122 29180 + AP_endonuc_2
CAZyme k141_10982 k141_10982_27 29207 30262 + GH177
Gene ID: k141_10982_15
Type: CAZyme
Location: 13230 - 15692 (+)
Gene ID: k141_10982_16
Type: pfam
Location: 15884 - 17077 (+)
Gene ID: k141_10982_17
Type: CAZyme
Location: 17067 - 19472 (+)
Gene ID: k141_10982_18
Type: pfam
Location: 19707 - 20669 (+)
Gene ID: k141_10982_19
Type: TC
Location: 20697 - 22013 (+)
Gene ID: k141_10982_20
Type: TF
Location: 22285 - 23061 (+)
Gene ID: k141_10982_21
Type: pfam
Location: 23237 - 24022 (+)
Gene ID: k141_10982_22
Type: CAZyme
Location: 24061 - 25125 (+)
Gene ID: k141_10982_23
Type: pfam
Location: 25521 - 26441 (+)
Gene ID: k141_10982_24
Type: CAZyme
Location: 26493 - 27605 (+)
Gene ID: k141_10982_25
Type: pfam
Location: 27714 - 28109 (+)
Gene ID: k141_10982_26
Type: pfam
Location: 28122 - 29180 (+)
Gene ID: k141_10982_27
Type: CAZyme
Location: 29207 - 30262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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