Cluster: CGMR017525_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR017525
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21895 | k141_21895_11 | 15550 | 17082 | + | GH78 |
| CAZyme | k141_21895 | k141_21895_12 | 17097 | 18854 | + | GH3 |
| pfam | k141_21895 | k141_21895_13 | 18903 | 19544 | + | Hydrolase | HAD_2 |
| TC | k141_21895 | k141_21895_14 | 19686 | 20444 | + | 3.A.1.122.14 |
| NULL(UNKNOWN) | k141_21895 | k141_21895_15 | 20431 | 22062 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_21895 | k141_21895_16 | 22019 | 23452 | + | 3.A.1.122.2 |
| TC | k141_21895 | k141_21895_17 | 23916 | 24926 | + | 3.A.1.34.1 |
| TC | k141_21895 | k141_21895_18 | 24970 | 25563 | + | 3.A.1.34.1 |
Gene ID: k141_21895_11
Type: CAZyme
Location: 15550 - 17082 (+)
Type: CAZyme
Location: 15550 - 17082 (+)
Gene ID: k141_21895_12
Type: CAZyme
Location: 17097 - 18854 (+)
Type: CAZyme
Location: 17097 - 18854 (+)
Gene ID: k141_21895_13
Type: pfam
Location: 18903 - 19544 (+)
Type: pfam
Location: 18903 - 19544 (+)
Gene ID: k141_21895_14
Type: TC
Location: 19686 - 20444 (+)
Type: TC
Location: 19686 - 20444 (+)
Gene ID: k141_21895_15
Type:
Location: 20431 - 22062 (+)
Type:
Location: 20431 - 22062 (+)
Gene ID: k141_21895_16
Type: TC
Location: 22019 - 23452 (+)
Type: TC
Location: 22019 - 23452 (+)
Gene ID: k141_21895_17
Type: TC
Location: 23916 - 24926 (+)
Type: TC
Location: 23916 - 24926 (+)
Gene ID: k141_21895_18
Type: TC
Location: 24970 - 25563 (+)
Type: TC
Location: 24970 - 25563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter vanvlietii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.