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Cluster: CGMR013258_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_420464 k141_420464_38 42393 43946 - 2.A.66.1.40
pfam k141_420464 k141_420464_39 43971 44993 - Stealth_CR2 | Stealth_CR1 | Stealth_CR3
pfam k141_420464 k141_420464_40 45022 46290 - DUF4832 | DUF4874
CAZyme k141_420464 k141_420464_41 46271 47062 - GT2
CAZyme k141_420464 k141_420464_42 47079 48281 - GT4
pfam k141_420464 k141_420464_43 48253 48627 - DUF2304
pfam k141_420464 k141_420464_44 48624 50099 - PelG
CAZyme k141_420464 k141_420464_45 50115 51539 - GT4
Gene ID: k141_420464_38
Type: TC
Location: 42393 - 43946 (-)
Gene ID: k141_420464_39
Type: pfam
Location: 43971 - 44993 (-)
Gene ID: k141_420464_40
Type: pfam
Location: 45022 - 46290 (-)
Gene ID: k141_420464_41
Type: CAZyme
Location: 46271 - 47062 (-)
Gene ID: k141_420464_42
Type: CAZyme
Location: 47079 - 48281 (-)
Gene ID: k141_420464_43
Type: pfam
Location: 48253 - 48627 (-)
Gene ID: k141_420464_44
Type: pfam
Location: 48624 - 50099 (-)
Gene ID: k141_420464_45
Type: CAZyme
Location: 50115 - 51539 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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