Cluster: CGMR013258_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013258
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14586 | k141_14586_17 | 17861 | 19219 | + | 2.A.86.1.8 |
| STP | k141_14586 | k141_14586_18 | 19395 | 21944 | + | TPR_2 |
| CAZyme | k141_14586 | k141_14586_19 | 22011 | 23915 | + | CBM48 | GH13_9 |
| pfam | k141_14586 | k141_14586_20 | 24084 | 27053 | + | DUF6240 | DUF6240 |
| pfam | k141_14586 | k141_14586_21 | 27022 | 27729 | - | Amidase_3 |
| CAZyme | k141_14586 | k141_14586_22 | 27814 | 29544 | - | GH18 |
Gene ID: k141_14586_17
Type: TC
Location: 17861 - 19219 (+)
Type: TC
Location: 17861 - 19219 (+)
Gene ID: k141_14586_18
Type: STP
Location: 19395 - 21944 (+)
Type: STP
Location: 19395 - 21944 (+)
Gene ID: k141_14586_19
Type: CAZyme
Location: 22011 - 23915 (+)
Type: CAZyme
Location: 22011 - 23915 (+)
Gene ID: k141_14586_20
Type: pfam
Location: 24084 - 27053 (+)
Type: pfam
Location: 24084 - 27053 (+)
Gene ID: k141_14586_21
Type: pfam
Location: 27022 - 27729 (-)
Type: pfam
Location: 27022 - 27729 (-)
Gene ID: k141_14586_22
Type: CAZyme
Location: 27814 - 29544 (-)
Type: CAZyme
Location: 27814 - 29544 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.