Cluster: CGMR013258_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013258
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_348338 | k141_348338_28 | 28799 | 30151 | + | 9.B.18.1.3 |
| CAZyme | k141_348338 | k141_348338_29 | 30181 | 31236 | + | GT2 |
| pfam | k141_348338 | k141_348338_30 | 31238 | 32980 | + | LicD | LicD |
| TC | k141_348338 | k141_348338_31 | 33035 | 33811 | + | 3.A.1.103.1 |
| TC | k141_348338 | k141_348338_32 | 33827 | 34621 | + | 3.A.1.103.5 |
Gene ID: k141_348338_28
Type: TC
Location: 28799 - 30151 (+)
Type: TC
Location: 28799 - 30151 (+)
Gene ID: k141_348338_29
Type: CAZyme
Location: 30181 - 31236 (+)
Type: CAZyme
Location: 30181 - 31236 (+)
Gene ID: k141_348338_30
Type: pfam
Location: 31238 - 32980 (+)
Type: pfam
Location: 31238 - 32980 (+)
Gene ID: k141_348338_31
Type: TC
Location: 33035 - 33811 (+)
Type: TC
Location: 33035 - 33811 (+)
Gene ID: k141_348338_32
Type: TC
Location: 33827 - 34621 (+)
Type: TC
Location: 33827 - 34621 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.