Cluster: CGMR012624_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: CGMR012624
- CGC Family ID: CGCFAM_00083
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_37055 | k141_37055_31 | 37036 | 38829 | + | GH93 |
| TF | k141_37055 | k141_37055_32 | 38835 | 42842 | + | HTH_AraC |
| CAZyme | k141_37055 | k141_37055_33 | 42947 | 44764 | + | GH2 |
| TC | k141_37055 | k141_37055_34 | 44858 | 48085 | + | 1.B.14.6.1 |
Gene ID: k141_37055_31
Type: CAZyme
Location: 37036 - 38829 (+)
Type: CAZyme
Location: 37036 - 38829 (+)
Gene ID: k141_37055_32
Type: TF
Location: 38835 - 42842 (+)
Type: TF
Location: 38835 - 42842 (+)
Gene ID: k141_37055_33
Type: CAZyme
Location: 42947 - 44764 (+)
Type: CAZyme
Location: 42947 - 44764 (+)
Gene ID: k141_37055_34
Type: TC
Location: 44858 - 48085 (+)
Type: TC
Location: 44858 - 48085 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_37055_33 | vegetarian > omnivore | 1.11399 | 0.03437 |