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Cluster: CGMR012624_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_101166 k141_101166_43 63264 64460 + GH88
CAZyme k141_101166 k141_101166_44 64561 66720 + PL12_2
pfam k141_101166 k141_101166_45 66727 68895 + SGBP_BT4661-like
TC k141_101166 k141_101166_46 68916 72062 + 1.B.14.6.1
TC k141_101166 k141_101166_47 72096 73790 + 8.A.46.1.3
CAZyme k141_101166 k141_101166_48 73851 76736 + PL8_2
CAZyme k141_101166 k141_101166_49 76733 79168 + GH95
CAZyme k141_101166 k141_101166_50 79276 82275 - GH2
CAZyme k141_101166 k141_101166_51 82415 83995 - GH20
Gene ID: k141_101166_43
Type: CAZyme
Location: 63264 - 64460 (+)
Gene ID: k141_101166_44
Type: CAZyme
Location: 64561 - 66720 (+)
Gene ID: k141_101166_45
Type: pfam
Location: 66727 - 68895 (+)
Gene ID: k141_101166_46
Type: TC
Location: 68916 - 72062 (+)
Gene ID: k141_101166_47
Type: TC
Location: 72096 - 73790 (+)
Gene ID: k141_101166_48
Type: CAZyme
Location: 73851 - 76736 (+)
Gene ID: k141_101166_49
Type: CAZyme
Location: 76733 - 79168 (+)
Gene ID: k141_101166_50
Type: CAZyme
Location: 79276 - 82275 (-)
Gene ID: k141_101166_51
Type: CAZyme
Location: 82415 - 83995 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_101166_46 vegan > omnivore 1.18556 0.04081

🧭 Explore Read Mapping of CGC

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