Cluster: CGMR012624_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR012624
- CGC Family ID: CGCFAM_01681
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_101166 | k141_101166_24 | 34663 | 36699 | - | GH13_8 |
| TC | k141_101166 | k141_101166_25 | 36897 | 38444 | + | 2.A.17.1.7 |
| STP | k141_101166 | k141_101166_26 | 38567 | 40609 | + | HATPase_c | HisKA |
| STP | k141_101166 | k141_101166_27 | 40754 | 41389 | + | TetR_N |
| TC | k141_101166 | k141_101166_28 | 41472 | 42788 | + | 1.B.17.2.10 |
| TC | k141_101166 | k141_101166_29 | 42816 | 43826 | + | 2.A.6.3.7 |
| TC | k141_101166 | k141_101166_30 | 43842 | 46982 | + | 2.A.6.3.6 |
| NULL(UNKNOWN) | k141_101166 | k141_101166_31 | 46998 | 47291 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_101166 | k141_101166_32 | 47378 | 49243 | - | GH2 |
| pfam | k141_101166 | k141_101166_33 | 49278 | 50360 | - | Metallophos |
| CAZyme | k141_101166 | k141_101166_34 | 50384 | 51394 | - | GH43_3 |
Gene ID: k141_101166_24
Type: CAZyme
Location: 34663 - 36699 (-)
Type: CAZyme
Location: 34663 - 36699 (-)
Gene ID: k141_101166_25
Type: TC
Location: 36897 - 38444 (+)
Type: TC
Location: 36897 - 38444 (+)
Gene ID: k141_101166_26
Type: STP
Location: 38567 - 40609 (+)
Type: STP
Location: 38567 - 40609 (+)
Gene ID: k141_101166_27
Type: STP
Location: 40754 - 41389 (+)
Type: STP
Location: 40754 - 41389 (+)
Gene ID: k141_101166_28
Type: TC
Location: 41472 - 42788 (+)
Type: TC
Location: 41472 - 42788 (+)
Gene ID: k141_101166_29
Type: TC
Location: 42816 - 43826 (+)
Type: TC
Location: 42816 - 43826 (+)
Gene ID: k141_101166_30
Type: TC
Location: 43842 - 46982 (+)
Type: TC
Location: 43842 - 46982 (+)
Gene ID: k141_101166_31
Type:
Location: 46998 - 47291 (+)
Type:
Location: 46998 - 47291 (+)
Gene ID: k141_101166_32
Type: CAZyme
Location: 47378 - 49243 (-)
Type: CAZyme
Location: 47378 - 49243 (-)
Gene ID: k141_101166_33
Type: pfam
Location: 49278 - 50360 (-)
Type: pfam
Location: 49278 - 50360 (-)
Gene ID: k141_101166_34
Type: CAZyme
Location: 50384 - 51394 (-)
Type: CAZyme
Location: 50384 - 51394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.