dbCAN Logo

Cluster: CGMR012624_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_73544 k141_73544_15 13348 15885 - GH2
TF k141_73544 k141_73544_16 15931 16794 - HTH_AraC | HTH_AraC
TC k141_73544 k141_73544_17 16951 18531 + 2.A.21.3.19
CAZyme k141_73544 k141_73544_18 18533 19561 + GH130_5
TC k141_73544 k141_73544_19 19711 22806 + 1.B.14.6.1
pfam k141_73544 k141_73544_20 22819 24336 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_73544 k141_73544_21 24359 25966 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_73544 k141_73544_22 26024 27505 + GH173
CAZyme k141_73544 k141_73544_23 27508 28983 + GH173
CAZyme k141_73544 k141_73544_24 29018 30172 + GH26
CAZyme k141_73544 k141_73544_25 30330 31907 - GH20
pfam k141_73544 k141_73544_26 31921 33114 - Lipase_GDSL_2
pfam k141_73544 k141_73544_27 33166 35313 - Fib_succ_major | SusE | SusE | SusE
CAZyme k141_73544 k141_73544_28 35325 37028 - GH136
pfam k141_73544 k141_73544_29 37048 38166 - Fib_succ_major
TC k141_73544 k141_73544_30 38184 39791 - 8.A.46.3.2
TC k141_73544 k141_73544_31 39795 42872 - 1.B.14.6.1
CAZyme k141_73544 k141_73544_32 42933 44045 - GH43_24
CAZyme k141_73544 k141_73544_33 44054 45913 - GH110
CAZyme k141_73544 k141_73544_34 45924 47771 - GH110
Gene ID: k141_73544_15
Type: CAZyme
Location: 13348 - 15885 (-)
Gene ID: k141_73544_16
Type: TF
Location: 15931 - 16794 (-)
Gene ID: k141_73544_17
Type: TC
Location: 16951 - 18531 (+)
Gene ID: k141_73544_18
Type: CAZyme
Location: 18533 - 19561 (+)
Gene ID: k141_73544_19
Type: TC
Location: 19711 - 22806 (+)
Gene ID: k141_73544_20
Type: pfam
Location: 22819 - 24336 (+)
Gene ID: k141_73544_21
Type:
Location: 24359 - 25966 (+)
Gene ID: k141_73544_22
Type: CAZyme
Location: 26024 - 27505 (+)
Gene ID: k141_73544_23
Type: CAZyme
Location: 27508 - 28983 (+)
Gene ID: k141_73544_24
Type: CAZyme
Location: 29018 - 30172 (+)
Gene ID: k141_73544_25
Type: CAZyme
Location: 30330 - 31907 (-)
Gene ID: k141_73544_26
Type: pfam
Location: 31921 - 33114 (-)
Gene ID: k141_73544_27
Type: pfam
Location: 33166 - 35313 (-)
Gene ID: k141_73544_28
Type: CAZyme
Location: 35325 - 37028 (-)
Gene ID: k141_73544_29
Type: pfam
Location: 37048 - 38166 (-)
Gene ID: k141_73544_30
Type: TC
Location: 38184 - 39791 (-)
Gene ID: k141_73544_31
Type: TC
Location: 39795 - 42872 (-)
Gene ID: k141_73544_32
Type: CAZyme
Location: 42933 - 44045 (-)
Gene ID: k141_73544_33
Type: CAZyme
Location: 44054 - 45913 (-)
Gene ID: k141_73544_34
Type: CAZyme
Location: 45924 - 47771 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List