Cluster: CGMR012624_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR012624
- CGC Family ID: CGCFAM_00617
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_109973 | k141_109973_29 | 28477 | 29466 | + | GT4 |
| STP | k141_109973 | k141_109973_30 | 29677 | 30087 | + | Glyoxalase |
| TC | k141_109973 | k141_109973_31 | 30093 | 31655 | + | 3.B.1.1.2 |
| NULL(UNKNOWN) | k141_109973 | k141_109973_32 | 31669 | 32004 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_109973 | k141_109973_33 | 32018 | 32479 | + | Biotin_lipoyl |
| TC | k141_109973 | k141_109973_34 | 32484 | 33695 | + | 3.B.1.1.5 |
Gene ID: k141_109973_29
Type: CAZyme
Location: 28477 - 29466 (+)
Type: CAZyme
Location: 28477 - 29466 (+)
Gene ID: k141_109973_30
Type: STP
Location: 29677 - 30087 (+)
Type: STP
Location: 29677 - 30087 (+)
Gene ID: k141_109973_31
Type: TC
Location: 30093 - 31655 (+)
Type: TC
Location: 30093 - 31655 (+)
Gene ID: k141_109973_32
Type:
Location: 31669 - 32004 (+)
Type:
Location: 31669 - 32004 (+)
Gene ID: k141_109973_33
Type: pfam
Location: 32018 - 32479 (+)
Type: pfam
Location: 32018 - 32479 (+)
Gene ID: k141_109973_34
Type: TC
Location: 32484 - 33695 (+)
Type: TC
Location: 32484 - 33695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.