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Cluster: CGMR012624_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_37055 k141_37055_171 231450 232169 + GT2
pfam k141_37055 k141_37055_172 232177 233397 + GT87
pfam k141_37055 k141_37055_173 233394 233762 - GtrA_DPMS_TM
CAZyme k141_37055 k141_37055_174 233759 235474 - GT83
STP k141_37055 k141_37055_175 235586 236209 + TetR_N
pfam k141_37055 k141_37055_176 236212 237492 + OEP | OEP
TC k141_37055 k141_37055_177 237507 238394 + 3.A.1.105.4
TC k141_37055 k141_37055_178 238411 239331 + 3.A.1.105.4
TC k141_37055 k141_37055_179 239321 240064 + 3.A.1.105.15
TC k141_37055 k141_37055_180 240066 241157 + 3.A.1.105.4
TC k141_37055 k141_37055_181 241365 242468 + 3.A.1.105.4
Gene ID: k141_37055_171
Type: CAZyme
Location: 231450 - 232169 (+)
Gene ID: k141_37055_172
Type: pfam
Location: 232177 - 233397 (+)
Gene ID: k141_37055_173
Type: pfam
Location: 233394 - 233762 (-)
Gene ID: k141_37055_174
Type: CAZyme
Location: 233759 - 235474 (-)
Gene ID: k141_37055_175
Type: STP
Location: 235586 - 236209 (+)
Gene ID: k141_37055_176
Type: pfam
Location: 236212 - 237492 (+)
Gene ID: k141_37055_177
Type: TC
Location: 237507 - 238394 (+)
Gene ID: k141_37055_178
Type: TC
Location: 238411 - 239331 (+)
Gene ID: k141_37055_179
Type: TC
Location: 239321 - 240064 (+)
Gene ID: k141_37055_180
Type: TC
Location: 240066 - 241157 (+)
Gene ID: k141_37055_181
Type: TC
Location: 241365 - 242468 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_37055_181 vegetarian > omnivore 1.18215 0.03437

🧭 Explore Read Mapping of CGC

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