Cluster: CGMR012624_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR012624
- CGC Family ID: CGCFAM_00023
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_33437 | k141_33437_4 | 4906 | 5856 | - | GH43_17 |
| sulfatase | k141_33437 | k141_33437_5 | 5884 | 7281 | - | S1_22 |
| NULL(UNKNOWN) | k141_33437 | k141_33437_6 | 7386 | 9332 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_33437 | k141_33437_7 | 9359 | 10801 | - | 8.A.46.1.3 |
| TC | k141_33437 | k141_33437_8 | 10817 | 13996 | - | 1.B.14.6.1 |
| CAZyme | k141_33437 | k141_33437_9 | 14512 | 15519 | + | GH43_17 |
| CAZyme | k141_33437 | k141_33437_10 | 15532 | 17757 | + | GH36 |
Gene ID: k141_33437_4
Type: CAZyme
Location: 4906 - 5856 (-)
Type: CAZyme
Location: 4906 - 5856 (-)
Gene ID: k141_33437_5
Type: sulfatase
Location: 5884 - 7281 (-)
Type: sulfatase
Location: 5884 - 7281 (-)
Gene ID: k141_33437_6
Type:
Location: 7386 - 9332 (-)
Type:
Location: 7386 - 9332 (-)
Gene ID: k141_33437_7
Type: TC
Location: 9359 - 10801 (-)
Type: TC
Location: 9359 - 10801 (-)
Gene ID: k141_33437_8
Type: TC
Location: 10817 - 13996 (-)
Type: TC
Location: 10817 - 13996 (-)
Gene ID: k141_33437_9
Type: CAZyme
Location: 14512 - 15519 (+)
Type: CAZyme
Location: 14512 - 15519 (+)
Gene ID: k141_33437_10
Type: CAZyme
Location: 15532 - 17757 (+)
Type: CAZyme
Location: 15532 - 17757 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.