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Cluster: CGMR009396_CGC89

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_112720 k141_112720_206 236091 239255 + 1.B.14.6.1
TC k141_112720 k141_112720_207 239259 240701 + 8.A.46.3.3
TC k141_112720 k141_112720_208 240945 241697 + 1.B.42.1.2
pfam k141_112720 k141_112720_209 241797 243368 - LRR_5
pfam k141_112720 k141_112720_210 243544 245961 + TonB_dep_Rec_b-barrel | Plug | CarboxypepD_reg | OMP_b-brl_3
CAZyme k141_112720 k141_112720_211 246007 248469 - GH95
TC k141_112720 k141_112720_212 248492 250339 - 3.A.1.106.1
CAZyme k141_112720 k141_112720_213 250453 252228 + GH123
Gene ID: k141_112720_206
Type: TC
Location: 236091 - 239255 (+)
Gene ID: k141_112720_207
Type: TC
Location: 239259 - 240701 (+)
Gene ID: k141_112720_208
Type: TC
Location: 240945 - 241697 (+)
Gene ID: k141_112720_209
Type: pfam
Location: 241797 - 243368 (-)
Gene ID: k141_112720_210
Type: pfam
Location: 243544 - 245961 (+)
Gene ID: k141_112720_211
Type: CAZyme
Location: 246007 - 248469 (-)
Gene ID: k141_112720_212
Type: TC
Location: 248492 - 250339 (-)
Gene ID: k141_112720_213
Type: CAZyme
Location: 250453 - 252228 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_112720_208 vegetarian > vegan 1.00032 0.04961

🧭 Explore Read Mapping of CGC

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