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Cluster: CGMR009396_CGC76

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_50556 k141_50556_27 28474 31638 + GH31_18
NULL(UNKNOWN) k141_50556 k141_50556_28 31716 32042 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_50556 k141_50556_29 32088 32768 + 9.B.186.1.3
pfam k141_50556 k141_50556_30 33009 33647 + LPAM_1 | DUF4136
pfam k141_50556 k141_50556_31 33711 34340 + OMP_b-brl
TC k141_50556 k141_50556_32 34634 37777 + 1.B.14.6.1
pfam k141_50556 k141_50556_33 37806 39338 + SusD_RagB | SusD-like_3
TC k141_50556 k141_50556_34 39356 42517 + 1.B.14.6.1
TC k141_50556 k141_50556_35 42530 44158 + 8.A.46.1.6
Gene ID: k141_50556_27
Type: CAZyme
Location: 28474 - 31638 (+)
Gene ID: k141_50556_28
Type:
Location: 31716 - 32042 (+)
Gene ID: k141_50556_29
Type: TC
Location: 32088 - 32768 (+)
Gene ID: k141_50556_30
Type: pfam
Location: 33009 - 33647 (+)
Gene ID: k141_50556_31
Type: pfam
Location: 33711 - 34340 (+)
Gene ID: k141_50556_32
Type: TC
Location: 34634 - 37777 (+)
Gene ID: k141_50556_33
Type: pfam
Location: 37806 - 39338 (+)
Gene ID: k141_50556_34
Type: TC
Location: 39356 - 42517 (+)
Gene ID: k141_50556_35
Type: TC
Location: 42530 - 44158 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50556_28 vegetarian > omnivore 1.27699 0.01375

🧭 Explore Read Mapping of CGC

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