Cluster: CGMR009396_CGC63
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_01034
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1950 | k141_1950_7 | 5741 | 7447 | + | 3.A.3.7.2 |
| TC | k141_1950 | k141_1950_8 | 7496 | 9529 | + | 3.A.3.7.2 |
| TC | k141_1950 | k141_1950_9 | 9542 | 10111 | + | 3.A.3.7.2 |
| NULL(UNKNOWN) | k141_1950 | k141_1950_10 | 10144 | 10857 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1950 | k141_1950_11 | 10885 | 13137 | + | GT20 |
| CAZyme | k141_1950 | k141_1950_12 | 13154 | 14938 | + | GH15 |
| pfam | k141_1950 | k141_1950_13 | 14973 | 16097 | + | KdpD |
| TC | k141_1950 | k141_1950_14 | 16112 | 17560 | + | 2.A.21.9.1 |
Gene ID: k141_1950_7
Type: TC
Location: 5741 - 7447 (+)
Type: TC
Location: 5741 - 7447 (+)
Gene ID: k141_1950_8
Type: TC
Location: 7496 - 9529 (+)
Type: TC
Location: 7496 - 9529 (+)
Gene ID: k141_1950_9
Type: TC
Location: 9542 - 10111 (+)
Type: TC
Location: 9542 - 10111 (+)
Gene ID: k141_1950_10
Type:
Location: 10144 - 10857 (+)
Type:
Location: 10144 - 10857 (+)
Gene ID: k141_1950_11
Type: CAZyme
Location: 10885 - 13137 (+)
Type: CAZyme
Location: 10885 - 13137 (+)
Gene ID: k141_1950_12
Type: CAZyme
Location: 13154 - 14938 (+)
Type: CAZyme
Location: 13154 - 14938 (+)
Gene ID: k141_1950_13
Type: pfam
Location: 14973 - 16097 (+)
Type: pfam
Location: 14973 - 16097 (+)
Gene ID: k141_1950_14
Type: TC
Location: 16112 - 17560 (+)
Type: TC
Location: 16112 - 17560 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.