Cluster: CGMR009396_CGC62
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_06740
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6127 | k141_6127_85 | 112380 | 114050 | + | 2.A.81.1.2 |
| TF | k141_6127 | k141_6127_86 | 114075 | 115175 | - | GntR |
| CAZyme | k141_6127 | k141_6127_87 | 115482 | 116960 | + | GH32 |
| pfam | k141_6127 | k141_6127_88 | 116973 | 118397 | + | FGGY_N |
| NULL(UNKNOWN) | k141_6127 | k141_6127_89 | 118434 | 120512 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_6127 | k141_6127_90 | 120848 | 124042 | + | 1.B.14.6.1 |
| pfam | k141_6127 | k141_6127_91 | 124068 | 125801 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_6127 | k141_6127_92 | 125922 | 128099 | + | GH32 |
| CAZyme | k141_6127 | k141_6127_93 | 128111 | 129637 | + | GH32 |
| TC | k141_6127 | k141_6127_94 | 129675 | 130835 | + | 2.A.1.7.17 |
| CAZyme | k141_6127 | k141_6127_95 | 130946 | 132550 | + | GH172 |
| pfam | k141_6127 | k141_6127_96 | 132594 | 133226 | - | DUF3256 |
| TC | k141_6127 | k141_6127_97 | 133240 | 134136 | - | 2.A.7.3.57 |
| pfam | k141_6127 | k141_6127_98 | 134183 | 134938 | - | PseudoU_synth_1 | PseudoU_synth_1 |
| TC | k141_6127 | k141_6127_99 | 135066 | 136664 | + | 2.A.81.1.2 |
Gene ID: k141_6127_85
Type: TC
Location: 112380 - 114050 (+)
Type: TC
Location: 112380 - 114050 (+)
Gene ID: k141_6127_86
Type: TF
Location: 114075 - 115175 (-)
Type: TF
Location: 114075 - 115175 (-)
Gene ID: k141_6127_87
Type: CAZyme
Location: 115482 - 116960 (+)
Type: CAZyme
Location: 115482 - 116960 (+)
Gene ID: k141_6127_88
Type: pfam
Location: 116973 - 118397 (+)
Type: pfam
Location: 116973 - 118397 (+)
Gene ID: k141_6127_89
Type:
Location: 118434 - 120512 (+)
Type:
Location: 118434 - 120512 (+)
Gene ID: k141_6127_90
Type: TC
Location: 120848 - 124042 (+)
Type: TC
Location: 120848 - 124042 (+)
Gene ID: k141_6127_91
Type: pfam
Location: 124068 - 125801 (+)
Type: pfam
Location: 124068 - 125801 (+)
Gene ID: k141_6127_92
Type: CAZyme
Location: 125922 - 128099 (+)
Type: CAZyme
Location: 125922 - 128099 (+)
Gene ID: k141_6127_93
Type: CAZyme
Location: 128111 - 129637 (+)
Type: CAZyme
Location: 128111 - 129637 (+)
Gene ID: k141_6127_94
Type: TC
Location: 129675 - 130835 (+)
Type: TC
Location: 129675 - 130835 (+)
Gene ID: k141_6127_95
Type: CAZyme
Location: 130946 - 132550 (+)
Type: CAZyme
Location: 130946 - 132550 (+)
Gene ID: k141_6127_96
Type: pfam
Location: 132594 - 133226 (-)
Type: pfam
Location: 132594 - 133226 (-)
Gene ID: k141_6127_97
Type: TC
Location: 133240 - 134136 (-)
Type: TC
Location: 133240 - 134136 (-)
Gene ID: k141_6127_98
Type: pfam
Location: 134183 - 134938 (-)
Type: pfam
Location: 134183 - 134938 (-)
Gene ID: k141_6127_99
Type: TC
Location: 135066 - 136664 (+)
Type: TC
Location: 135066 - 136664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.