Cluster: CGMR009396_CGC49
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_08202
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50353 | k141_50353_45 | 58898 | 61708 | - | 1.B.14.10.1 |
| pfam | k141_50353 | k141_50353_46 | 61727 | 63019 | - | DUF4925 |
| TF | k141_50353 | k141_50353_47 | 63184 | 64029 | + | HTH_AraC |
| CAZyme | k141_50353 | k141_50353_48 | 64035 | 65528 | - | GH125 |
| CAZyme | k141_50353 | k141_50353_49 | 65538 | 66728 | - | GH76 |
Gene ID: k141_50353_45
Type: TC
Location: 58898 - 61708 (-)
Type: TC
Location: 58898 - 61708 (-)
Gene ID: k141_50353_46
Type: pfam
Location: 61727 - 63019 (-)
Type: pfam
Location: 61727 - 63019 (-)
Gene ID: k141_50353_47
Type: TF
Location: 63184 - 64029 (+)
Type: TF
Location: 63184 - 64029 (+)
Gene ID: k141_50353_48
Type: CAZyme
Location: 64035 - 65528 (-)
Type: CAZyme
Location: 64035 - 65528 (-)
Gene ID: k141_50353_49
Type: CAZyme
Location: 65538 - 66728 (-)
Type: CAZyme
Location: 65538 - 66728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_50353_48 | vegan > omnivore | 1.00252 | 0.01431 |