Cluster: CGMR009396_CGC47
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_08201
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_6085 | k141_6085_81 | 97831 | 99000 | + | GT2 |
| CAZyme | k141_6085 | k141_6085_82 | 99007 | 100194 | + | GT2 |
| CAZyme | k141_6085 | k141_6085_83 | 100200 | 101324 | + | GT4 |
| pfam | k141_6085 | k141_6085_84 | 101264 | 102496 | + | ATPgrasp_ST |
| pfam | k141_6085 | k141_6085_85 | 102508 | 103143 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| TC | k141_6085 | k141_6085_86 | 103170 | 104615 | + | 2.A.66.2.23 |
| CAZyme | k141_6085 | k141_6085_87 | 104612 | 105739 | + | GT4 |
| CAZyme | k141_6085 | k141_6085_88 | 105740 | 106627 | - | GT2 |
| pfam | k141_6085 | k141_6085_89 | 106787 | 107737 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | k141_6085 | k141_6085_90 | 107746 | 108933 | + | GT2 |
| STP | k141_6085 | k141_6085_91 | 108946 | 110145 | + | HATPase_c | HisKA | Response_reg |
| sulfatase | k141_6085 | k141_6085_92 | 110228 | 111385 | - | S1_7 |
| TC | k141_6085 | k141_6085_93 | 111422 | 112006 | - | 3.A.8.1.1 |
| pfam | k141_6085 | k141_6085_94 | 112215 | 113633 | + | PDZ | DUF4136 | PDZ_6 |
| pfam | k141_6085 | k141_6085_95 | 113648 | 116125 | + | MutS_V | Smr | MSSS |
| TC | k141_6085 | k141_6085_96 | 116137 | 117219 | + | 1.A.35.3.2 |
Gene ID: k141_6085_81
Type: CAZyme
Location: 97831 - 99000 (+)
Type: CAZyme
Location: 97831 - 99000 (+)
Gene ID: k141_6085_82
Type: CAZyme
Location: 99007 - 100194 (+)
Type: CAZyme
Location: 99007 - 100194 (+)
Gene ID: k141_6085_83
Type: CAZyme
Location: 100200 - 101324 (+)
Type: CAZyme
Location: 100200 - 101324 (+)
Gene ID: k141_6085_84
Type: pfam
Location: 101264 - 102496 (+)
Type: pfam
Location: 101264 - 102496 (+)
Gene ID: k141_6085_85
Type: pfam
Location: 102508 - 103143 (+)
Type: pfam
Location: 102508 - 103143 (+)
Gene ID: k141_6085_86
Type: TC
Location: 103170 - 104615 (+)
Type: TC
Location: 103170 - 104615 (+)
Gene ID: k141_6085_87
Type: CAZyme
Location: 104612 - 105739 (+)
Type: CAZyme
Location: 104612 - 105739 (+)
Gene ID: k141_6085_88
Type: CAZyme
Location: 105740 - 106627 (-)
Type: CAZyme
Location: 105740 - 106627 (-)
Gene ID: k141_6085_89
Type: pfam
Location: 106787 - 107737 (+)
Type: pfam
Location: 106787 - 107737 (+)
Gene ID: k141_6085_90
Type: CAZyme
Location: 107746 - 108933 (+)
Type: CAZyme
Location: 107746 - 108933 (+)
Gene ID: k141_6085_91
Type: STP
Location: 108946 - 110145 (+)
Type: STP
Location: 108946 - 110145 (+)
Gene ID: k141_6085_92
Type: sulfatase
Location: 110228 - 111385 (-)
Type: sulfatase
Location: 110228 - 111385 (-)
Gene ID: k141_6085_93
Type: TC
Location: 111422 - 112006 (-)
Type: TC
Location: 111422 - 112006 (-)
Gene ID: k141_6085_94
Type: pfam
Location: 112215 - 113633 (+)
Type: pfam
Location: 112215 - 113633 (+)
Gene ID: k141_6085_95
Type: pfam
Location: 113648 - 116125 (+)
Type: pfam
Location: 113648 - 116125 (+)
Gene ID: k141_6085_96
Type: TC
Location: 116137 - 117219 (+)
Type: TC
Location: 116137 - 117219 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.