Cluster: CGMR009396_CGC32
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR009396
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_32124 | k141_32124_91 | 124309 | 125676 | - | 2.A.22.5.3 |
| TC | k141_32124 | k141_32124_92 | 125707 | 126366 | - | 3.A.1.125.1 |
| pfam | k141_32124 | k141_32124_93 | 126363 | 127079 | - | ThiF |
| CAZyme | k141_32124 | k141_32124_94 | 127254 | 129224 | + | GH20 |
| CAZyme | k141_32124 | k141_32124_95 | 129326 | 131599 | - | GH3 |
| CAZyme | k141_32124 | k141_32124_96 | 131838 | 133190 | - | GH144 |
| TC | k141_32124 | k141_32124_97 | 133211 | 134734 | - | 8.A.46.1.3 |
| TC | k141_32124 | k141_32124_98 | 134756 | 137758 | - | 1.B.14.6.1 |
| STP | k141_32124 | k141_32124_99 | 138006 | 140864 | - | Y_Y_Y |
| CAZyme | k141_32124 | k141_32124_100 | 140983 | 143028 | - | GH127 |
| CAZyme | k141_32124 | k141_32124_101 | 143053 | 144897 | - | GH127 |
| TF | k141_32124 | k141_32124_102 | 145773 | 146342 | + | GerE |
| STP | k141_32124 | k141_32124_103 | 146492 | 147433 | + | FecR |
| TC | k141_32124 | k141_32124_104 | 147577 | 151104 | + | 1.B.14.6.1 |
| pfam | k141_32124 | k141_32124_105 | 151124 | 152917 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_32124 | k141_32124_106 | 153045 | 155099 | + | GH20 |
| NULL(UNKNOWN) | k141_32124 | k141_32124_107 | 155119 | 156504 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_32124 | k141_32124_108 | 156521 | 158206 | + | GH123 |
| NULL(UNKNOWN) | k141_32124 | k141_32124_109 | 158220 | 160664 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_32124 | k141_32124_110 | 160775 | 162289 | - | GH76 |
Gene ID: k141_32124_91
Type: TC
Location: 124309 - 125676 (-)
Type: TC
Location: 124309 - 125676 (-)
Gene ID: k141_32124_92
Type: TC
Location: 125707 - 126366 (-)
Type: TC
Location: 125707 - 126366 (-)
Gene ID: k141_32124_93
Type: pfam
Location: 126363 - 127079 (-)
Type: pfam
Location: 126363 - 127079 (-)
Gene ID: k141_32124_94
Type: CAZyme
Location: 127254 - 129224 (+)
Type: CAZyme
Location: 127254 - 129224 (+)
Gene ID: k141_32124_95
Type: CAZyme
Location: 129326 - 131599 (-)
Type: CAZyme
Location: 129326 - 131599 (-)
Gene ID: k141_32124_96
Type: CAZyme
Location: 131838 - 133190 (-)
Type: CAZyme
Location: 131838 - 133190 (-)
Gene ID: k141_32124_97
Type: TC
Location: 133211 - 134734 (-)
Type: TC
Location: 133211 - 134734 (-)
Gene ID: k141_32124_98
Type: TC
Location: 134756 - 137758 (-)
Type: TC
Location: 134756 - 137758 (-)
Gene ID: k141_32124_99
Type: STP
Location: 138006 - 140864 (-)
Type: STP
Location: 138006 - 140864 (-)
Gene ID: k141_32124_100
Type: CAZyme
Location: 140983 - 143028 (-)
Type: CAZyme
Location: 140983 - 143028 (-)
Gene ID: k141_32124_101
Type: CAZyme
Location: 143053 - 144897 (-)
Type: CAZyme
Location: 143053 - 144897 (-)
Gene ID: k141_32124_102
Type: TF
Location: 145773 - 146342 (+)
Type: TF
Location: 145773 - 146342 (+)
Gene ID: k141_32124_103
Type: STP
Location: 146492 - 147433 (+)
Type: STP
Location: 146492 - 147433 (+)
Gene ID: k141_32124_104
Type: TC
Location: 147577 - 151104 (+)
Type: TC
Location: 147577 - 151104 (+)
Gene ID: k141_32124_105
Type: pfam
Location: 151124 - 152917 (+)
Type: pfam
Location: 151124 - 152917 (+)
Gene ID: k141_32124_106
Type: CAZyme
Location: 153045 - 155099 (+)
Type: CAZyme
Location: 153045 - 155099 (+)
Gene ID: k141_32124_107
Type:
Location: 155119 - 156504 (+)
Type:
Location: 155119 - 156504 (+)
Gene ID: k141_32124_108
Type: CAZyme
Location: 156521 - 158206 (+)
Type: CAZyme
Location: 156521 - 158206 (+)
Gene ID: k141_32124_109
Type:
Location: 158220 - 160664 (+)
Type:
Location: 158220 - 160664 (+)
Gene ID: k141_32124_110
Type: CAZyme
Location: 160775 - 162289 (-)
Type: CAZyme
Location: 160775 - 162289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_32124_102 | vegetarian > omnivore | 1.02850 | 0.01375 |