Cluster: CGMR009396_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_01021
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_112713 | k141_112713_16 | 19968 | 21128 | - | CE9 |
| CAZyme | k141_112713 | k141_112713_17 | 21141 | 22370 | - | CE9 |
| TC | k141_112713 | k141_112713_18 | 22409 | 24346 | - | 3.A.1.121.4 |
| pfam | k141_112713 | k141_112713_19 | 24666 | 26321 | - | SusD_RagB | SusD-like_3 |
| TC | k141_112713 | k141_112713_20 | 26356 | 29451 | - | 1.B.14.6.1 |
| pfam | k141_112713 | k141_112713_21 | 30977 | 31531 | + | DUF3332 |
| CAZyme | k141_112713 | k141_112713_22 | 31621 | 35007 | + | GH2 |
Gene ID: k141_112713_16
Type: CAZyme
Location: 19968 - 21128 (-)
Type: CAZyme
Location: 19968 - 21128 (-)
Gene ID: k141_112713_17
Type: CAZyme
Location: 21141 - 22370 (-)
Type: CAZyme
Location: 21141 - 22370 (-)
Gene ID: k141_112713_18
Type: TC
Location: 22409 - 24346 (-)
Type: TC
Location: 22409 - 24346 (-)
Gene ID: k141_112713_19
Type: pfam
Location: 24666 - 26321 (-)
Type: pfam
Location: 24666 - 26321 (-)
Gene ID: k141_112713_20
Type: TC
Location: 26356 - 29451 (-)
Type: TC
Location: 26356 - 29451 (-)
Gene ID: k141_112713_21
Type: pfam
Location: 30977 - 31531 (+)
Type: pfam
Location: 30977 - 31531 (+)
Gene ID: k141_112713_22
Type: CAZyme
Location: 31621 - 35007 (+)
Type: CAZyme
Location: 31621 - 35007 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.