Cluster: CGMR007519_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: CGMR007519
- CGC Family ID: CGCFAM_00243
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28212 | k141_28212_4 | 4805 | 5203 | - | 4.A.6.1.18 |
| TC | k141_28212 | k141_28212_5 | 5224 | 6042 | - | 4.A.6.1.18 |
| TC | k141_28212 | k141_28212_6 | 6029 | 6937 | - | 4.A.6.1.18 |
| TC | k141_28212 | k141_28212_7 | 6954 | 7442 | - | 4.A.6.1.18 |
| CAZyme | k141_28212 | k141_28212_8 | 7541 | 8707 | - | CE9 |
| STP | k141_28212 | k141_28212_9 | 8722 | 9891 | - | SIS | SIS |
| TF | k141_28212 | k141_28212_10 | 9909 | 10625 | - | GntR |
| TC | k141_28212 | k141_28212_11 | 10804 | 12759 | - | 4.A.2.1.8 |
Gene ID: k141_28212_4
Type: TC
Location: 4805 - 5203 (-)
Type: TC
Location: 4805 - 5203 (-)
Gene ID: k141_28212_5
Type: TC
Location: 5224 - 6042 (-)
Type: TC
Location: 5224 - 6042 (-)
Gene ID: k141_28212_6
Type: TC
Location: 6029 - 6937 (-)
Type: TC
Location: 6029 - 6937 (-)
Gene ID: k141_28212_7
Type: TC
Location: 6954 - 7442 (-)
Type: TC
Location: 6954 - 7442 (-)
Gene ID: k141_28212_8
Type: CAZyme
Location: 7541 - 8707 (-)
Type: CAZyme
Location: 7541 - 8707 (-)
Gene ID: k141_28212_9
Type: STP
Location: 8722 - 9891 (-)
Type: STP
Location: 8722 - 9891 (-)
Gene ID: k141_28212_10
Type: TF
Location: 9909 - 10625 (-)
Type: TF
Location: 9909 - 10625 (-)
Gene ID: k141_28212_11
Type: TC
Location: 10804 - 12759 (-)
Type: TC
Location: 10804 - 12759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus acidophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.