Cluster: CGMR007519_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR007519
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_7017 | k141_7017_18 | 20671 | 22158 | - | 3.A.18.1.1 |
| pfam | k141_7017 | k141_7017_19 | 22172 | 23539 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| pfam | k141_7017 | k141_7017_20 | 23666 | 23911 | - | Ribosomal_L31 |
| CAZyme | k141_7017 | k141_7017_21 | 24021 | 25640 | - | GH13_31 |
| pfam | k141_7017 | k141_7017_22 | 25758 | 26588 | + | S6PP | Hydrolase_3 |
| TC | k141_7017 | k141_7017_23 | 26630 | 28222 | - | 2.A.3.11.1 |
Gene ID: k141_7017_18
Type: TC
Location: 20671 - 22158 (-)
Type: TC
Location: 20671 - 22158 (-)
Gene ID: k141_7017_19
Type: pfam
Location: 22172 - 23539 (-)
Type: pfam
Location: 22172 - 23539 (-)
Gene ID: k141_7017_20
Type: pfam
Location: 23666 - 23911 (-)
Type: pfam
Location: 23666 - 23911 (-)
Gene ID: k141_7017_21
Type: CAZyme
Location: 24021 - 25640 (-)
Type: CAZyme
Location: 24021 - 25640 (-)
Gene ID: k141_7017_22
Type: pfam
Location: 25758 - 26588 (+)
Type: pfam
Location: 25758 - 26588 (+)
Gene ID: k141_7017_23
Type: TC
Location: 26630 - 28222 (-)
Type: TC
Location: 26630 - 28222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus acidophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.