Cluster: CGMR007519_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR007519
- CGC Family ID: CGCFAM_01879
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_38460 | k141_38460_6 | 5554 | 7563 | + | 4.A.1.1.14 |
| STP | k141_38460 | k141_38460_7 | 8000 | 8704 | - | AraC_binding |
| pfam | k141_38460 | k141_38460_8 | 8809 | 10101 | + | Sugar_tr | MFS_1 |
| CAZyme | k141_38460 | k141_38460_9 | 10104 | 11681 | + | GH78 |
Gene ID: k141_38460_6
Type: TC
Location: 5554 - 7563 (+)
Type: TC
Location: 5554 - 7563 (+)
Gene ID: k141_38460_7
Type: STP
Location: 8000 - 8704 (-)
Type: STP
Location: 8000 - 8704 (-)
Gene ID: k141_38460_8
Type: pfam
Location: 8809 - 10101 (+)
Type: pfam
Location: 8809 - 10101 (+)
Gene ID: k141_38460_9
Type: CAZyme
Location: 10104 - 11681 (+)
Type: CAZyme
Location: 10104 - 11681 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus acidophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.