Cluster: CGMR006612_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR006612
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_92178 | k141_92178_59 | 61218 | 61583 | - | 2.A.7.34.6 |
| pfam | k141_92178 | k141_92178_60 | 61821 | 62930 | + | Glyco_tran_WbsX |
| CAZyme | k141_92178 | k141_92178_61 | 62911 | 63891 | + | GT2 |
| CAZyme | k141_92178 | k141_92178_62 | 63893 | 65005 | + | GT4 |
Gene ID: k141_92178_59
Type: TC
Location: 61218 - 61583 (-)
Type: TC
Location: 61218 - 61583 (-)
Gene ID: k141_92178_60
Type: pfam
Location: 61821 - 62930 (+)
Type: pfam
Location: 61821 - 62930 (+)
Gene ID: k141_92178_61
Type: CAZyme
Location: 62911 - 63891 (+)
Type: CAZyme
Location: 62911 - 63891 (+)
Gene ID: k141_92178_62
Type: CAZyme
Location: 63893 - 65005 (+)
Type: CAZyme
Location: 63893 - 65005 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900550375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_92178_61 | vegetarian > vegan | 1.10035 | 0.00455 |