Cluster: CGMR001700_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001700
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_36172 | k141_36172_13 | 9576 | 10136 | + | 3.A.1.30.2 |
| TC | k141_36172 | k141_36172_14 | 10138 | 11472 | + | 3.A.1.30.2 |
| TC | k141_36172 | k141_36172_15 | 11469 | 12122 | + | 3.A.1.30.2 |
| CAZyme | k141_36172 | k141_36172_16 | 12190 | 13797 | - | GH13_31 |
| TC | k141_36172 | k141_36172_17 | 14020 | 14928 | + | 3.A.1.131.1 |
Gene ID: k141_36172_13
Type: TC
Location: 9576 - 10136 (+)
Type: TC
Location: 9576 - 10136 (+)
Gene ID: k141_36172_14
Type: TC
Location: 10138 - 11472 (+)
Type: TC
Location: 10138 - 11472 (+)
Gene ID: k141_36172_15
Type: TC
Location: 11469 - 12122 (+)
Type: TC
Location: 11469 - 12122 (+)
Gene ID: k141_36172_16
Type: CAZyme
Location: 12190 - 13797 (-)
Type: CAZyme
Location: 12190 - 13797 (-)
Gene ID: k141_36172_17
Type: TC
Location: 14020 - 14928 (+)
Type: TC
Location: 14020 - 14928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.