Cluster: CGMR001000_CGC84
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR001000
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_7356 | k141_7356_5 | 3374 | 4480 | - | 3.A.2.1.7 |
| NULL(UNKNOWN) | k141_7356 | k141_7356_6 | 4464 | 4895 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_7356 | k141_7356_7 | 4938 | 5183 | - | ATP-synt_DE_N |
| TC | k141_7356 | k141_7356_8 | 5201 | 6721 | - | 3.A.2.1.3 |
| pfam | k141_7356 | k141_7356_9 | 7285 | 8439 | - | Aminotran_1_2 | Aminotran_5 | DegT_DnrJ_EryC1 |
| pfam | k141_7356 | k141_7356_10 | 8453 | 9037 | - | Hexapep | Hexapep_2 | PglD_N |
| TC | k141_7356 | k141_7356_11 | 9042 | 9650 | - | 9.B.18.1.3 |
| CAZyme | k141_7356 | k141_7356_12 | 9858 | 11075 | - | GT4 |
| CAZyme | k141_7356 | k141_7356_13 | 11077 | 12951 | - | PL12 |
| pfam | k141_7356 | k141_7356_14 | 12951 | 15074 | - | ADH_zinc_N | GFO_IDH_MocA | TrkA_N | ADH_N | GFO_IDH_MocA_C3 |
| CAZyme | k141_7356 | k141_7356_15 | 15077 | 16117 | - | GT4 |
| CAZyme | k141_7356 | k141_7356_16 | 16162 | 17229 | - | GT4 |
| pfam | k141_7356 | k141_7356_17 | 17195 | 18451 | - | Wzy_C |
| TC | k141_7356 | k141_7356_18 | 18456 | 19763 | - | 2.A.66.4.7 |
Gene ID: k141_7356_5
Type: TC
Location: 3374 - 4480 (-)
Type: TC
Location: 3374 - 4480 (-)
Gene ID: k141_7356_6
Type:
Location: 4464 - 4895 (-)
Type:
Location: 4464 - 4895 (-)
Gene ID: k141_7356_7
Type: pfam
Location: 4938 - 5183 (-)
Type: pfam
Location: 4938 - 5183 (-)
Gene ID: k141_7356_8
Type: TC
Location: 5201 - 6721 (-)
Type: TC
Location: 5201 - 6721 (-)
Gene ID: k141_7356_9
Type: pfam
Location: 7285 - 8439 (-)
Type: pfam
Location: 7285 - 8439 (-)
Gene ID: k141_7356_10
Type: pfam
Location: 8453 - 9037 (-)
Type: pfam
Location: 8453 - 9037 (-)
Gene ID: k141_7356_11
Type: TC
Location: 9042 - 9650 (-)
Type: TC
Location: 9042 - 9650 (-)
Gene ID: k141_7356_12
Type: CAZyme
Location: 9858 - 11075 (-)
Type: CAZyme
Location: 9858 - 11075 (-)
Gene ID: k141_7356_13
Type: CAZyme
Location: 11077 - 12951 (-)
Type: CAZyme
Location: 11077 - 12951 (-)
Gene ID: k141_7356_14
Type: pfam
Location: 12951 - 15074 (-)
Type: pfam
Location: 12951 - 15074 (-)
Gene ID: k141_7356_15
Type: CAZyme
Location: 15077 - 16117 (-)
Type: CAZyme
Location: 15077 - 16117 (-)
Gene ID: k141_7356_16
Type: CAZyme
Location: 16162 - 17229 (-)
Type: CAZyme
Location: 16162 - 17229 (-)
Gene ID: k141_7356_17
Type: pfam
Location: 17195 - 18451 (-)
Type: pfam
Location: 17195 - 18451 (-)
Gene ID: k141_7356_18
Type: TC
Location: 18456 - 19763 (-)
Type: TC
Location: 18456 - 19763 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.