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Cluster: CGMR001000_CGC83

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_17120 k141_17120_2 587 1936 - GH105
CAZyme k141_17120 k141_17120_3 2022 6479 - PL8_3
pfam k141_17120 k141_17120_4 6623 8485 - SusD_RagB | SusD-like_3
TC k141_17120 k141_17120_5 8499 11855 - 1.B.14.6.1
pfam k141_17120 k141_17120_6 12015 13184 - F5_F8_type_C | Big_2
CAZyme k141_17120 k141_17120_7 13210 15543 - CBM32
STP k141_17120 k141_17120_8 15646 16665 - FecR
TF k141_17120 k141_17120_9 16790 17332 + GerE
CAZyme k141_17120 k141_17120_10 17427 21269 - GH31_18
Gene ID: k141_17120_2
Type: CAZyme
Location: 587 - 1936 (-)
Gene ID: k141_17120_3
Type: CAZyme
Location: 2022 - 6479 (-)
Gene ID: k141_17120_4
Type: pfam
Location: 6623 - 8485 (-)
Gene ID: k141_17120_5
Type: TC
Location: 8499 - 11855 (-)
Gene ID: k141_17120_6
Type: pfam
Location: 12015 - 13184 (-)
Gene ID: k141_17120_7
Type: CAZyme
Location: 13210 - 15543 (-)
Gene ID: k141_17120_8
Type: STP
Location: 15646 - 16665 (-)
Gene ID: k141_17120_9
Type: TF
Location: 16790 - 17332 (+)
Gene ID: k141_17120_10
Type: CAZyme
Location: 17427 - 21269 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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