Cluster: CGMR001000_CGC82
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_07155
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_7343 | k141_7343_1 | 172 | 1260 | + | PL10_1 |
| CAZyme | k141_7343 | k141_7343_2 | 1375 | 3528 | - | GH89 |
| TC | k141_7343 | k141_7343_3 | 3542 | 4702 | - | 9.B.97.1.2 |
| pfam | k141_7343 | k141_7343_4 | 4805 | 6457 | - | Fumerase | Fumerase_C |
| NULL(UNKNOWN) | k141_7343 | k141_7343_5 | 6486 | 6731 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_7343 | k141_7343_6 | 6778 | 8772 | - | GH20 |
| pfam | k141_7343 | k141_7343_7 | 9131 | 11038 | - | SusD_RagB | SusD-like_3 |
| TC | k141_7343 | k141_7343_8 | 11054 | 14341 | - | 1.B.14.6.1 |
Gene ID: k141_7343_1
Type: CAZyme
Location: 172 - 1260 (+)
Type: CAZyme
Location: 172 - 1260 (+)
Gene ID: k141_7343_2
Type: CAZyme
Location: 1375 - 3528 (-)
Type: CAZyme
Location: 1375 - 3528 (-)
Gene ID: k141_7343_3
Type: TC
Location: 3542 - 4702 (-)
Type: TC
Location: 3542 - 4702 (-)
Gene ID: k141_7343_4
Type: pfam
Location: 4805 - 6457 (-)
Type: pfam
Location: 4805 - 6457 (-)
Gene ID: k141_7343_5
Type:
Location: 6486 - 6731 (-)
Type:
Location: 6486 - 6731 (-)
Gene ID: k141_7343_6
Type: CAZyme
Location: 6778 - 8772 (-)
Type: CAZyme
Location: 6778 - 8772 (-)
Gene ID: k141_7343_7
Type: pfam
Location: 9131 - 11038 (-)
Type: pfam
Location: 9131 - 11038 (-)
Gene ID: k141_7343_8
Type: TC
Location: 11054 - 14341 (-)
Type: TC
Location: 11054 - 14341 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.