Cluster: CGMR001000_CGC77
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_05305
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_14402 | k141_14402_16 | 27836 | 28987 | - | CE19 |
| CAZyme | k141_14402 | k141_14402_17 | 29003 | 30730 | - | CE12 | CE8 |
| STP | k141_14402 | k141_14402_18 | 30852 | 31193 | + | AraC_binding |
| CAZyme | k141_14402 | k141_14402_19 | 31510 | 32466 | - | CE8 |
| CAZyme | k141_14402 | k141_14402_20 | 32466 | 33665 | - | GH105 |
| TC | k141_14402 | k141_14402_21 | 33953 | 35467 | + | 2.A.1.14.25 |
Gene ID: k141_14402_16
Type: CAZyme
Location: 27836 - 28987 (-)
Type: CAZyme
Location: 27836 - 28987 (-)
Gene ID: k141_14402_17
Type: CAZyme
Location: 29003 - 30730 (-)
Type: CAZyme
Location: 29003 - 30730 (-)
Gene ID: k141_14402_18
Type: STP
Location: 30852 - 31193 (+)
Type: STP
Location: 30852 - 31193 (+)
Gene ID: k141_14402_19
Type: CAZyme
Location: 31510 - 32466 (-)
Type: CAZyme
Location: 31510 - 32466 (-)
Gene ID: k141_14402_20
Type: CAZyme
Location: 32466 - 33665 (-)
Type: CAZyme
Location: 32466 - 33665 (-)
Gene ID: k141_14402_21
Type: TC
Location: 33953 - 35467 (+)
Type: TC
Location: 33953 - 35467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.