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Cluster: CGMR001000_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_46135 k141_46135_48 66541 68790 - GH3
CAZyme k141_46135 k141_46135_49 68793 70079 - GH158
CAZyme k141_46135 k141_46135_50 70162 71004 - GH16_3
TC k141_46135 k141_46135_51 71008 72684 - 8.A.46.1.3
TC k141_46135 k141_46135_52 72705 75836 - 1.B.14.6.2
STP k141_46135 k141_46135_53 76054 78945 - Y_Y_Y
pfam k141_46135 k141_46135_54 79463 80023 + DUF4199
CAZyme k141_46135 k141_46135_55 80052 81005 + GT2
pfam k141_46135 k141_46135_56 81040 81546 + DUF6452
pfam k141_46135 k141_46135_57 81503 82282 + DUF6048
TC k141_46135 k141_46135_58 82288 82869 + 2.A.107.1.2
pfam k141_46135 k141_46135_59 82882 83889 + ApbE
TC k141_46135 k141_46135_60 84136 84507 - 2.A.7.34.3
Gene ID: k141_46135_48
Type: CAZyme
Location: 66541 - 68790 (-)
Gene ID: k141_46135_49
Type: CAZyme
Location: 68793 - 70079 (-)
Gene ID: k141_46135_50
Type: CAZyme
Location: 70162 - 71004 (-)
Gene ID: k141_46135_51
Type: TC
Location: 71008 - 72684 (-)
Gene ID: k141_46135_52
Type: TC
Location: 72705 - 75836 (-)
Gene ID: k141_46135_53
Type: STP
Location: 76054 - 78945 (-)
Gene ID: k141_46135_54
Type: pfam
Location: 79463 - 80023 (+)
Gene ID: k141_46135_55
Type: CAZyme
Location: 80052 - 81005 (+)
Gene ID: k141_46135_56
Type: pfam
Location: 81040 - 81546 (+)
Gene ID: k141_46135_57
Type: pfam
Location: 81503 - 82282 (+)
Gene ID: k141_46135_58
Type: TC
Location: 82288 - 82869 (+)
Gene ID: k141_46135_59
Type: pfam
Location: 82882 - 83889 (+)
Gene ID: k141_46135_60
Type: TC
Location: 84136 - 84507 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_46135_58 vegan > omnivore 1.16939 0.02513

🧭 Explore Read Mapping of CGC

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