Cluster: CGMR001000_CGC70
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_07422
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_46135 | k141_46135_6 | 5348 | 6340 | - | 2.A.98.1.3 |
| CAZyme | k141_46135 | k141_46135_7 | 6535 | 7695 | - | CE19 |
| CAZyme | k141_46135 | k141_46135_8 | 7759 | 10623 | - | GH106 |
| pfam | k141_46135 | k141_46135_9 | 10644 | 11975 | - | PKD | BT_3987-like_N | DUF5013 | PKD_4 |
| pfam | k141_46135 | k141_46135_10 | 12005 | 13744 | - | SusD_RagB | SusD-like_3 |
| TC | k141_46135 | k141_46135_11 | 13760 | 16579 | - | 1.B.14.6.1 |
| pfam | k141_46135 | k141_46135_12 | 16615 | 18351 | - | SusD_RagB | SusD-like_3 |
| TC | k141_46135 | k141_46135_13 | 18364 | 21570 | - | 1.B.14.6.1 |
| CAZyme | k141_46135 | k141_46135_14 | 21575 | 23116 | - | GH28 |
| CAZyme | k141_46135 | k141_46135_15 | 23137 | 25089 | - | CE20 | CE20 |
| CAZyme | k141_46135 | k141_46135_16 | 25110 | 27317 | - | GH36 |
| CAZyme | k141_46135 | k141_46135_17 | 27342 | 28865 | - | CE20 |
| CAZyme | k141_46135 | k141_46135_18 | 28922 | 30895 | - | GH110 |
| CAZyme | k141_46135 | k141_46135_19 | 30936 | 32297 | - | GH175 |
| NULL(UNKNOWN) | k141_46135 | k141_46135_20 | 32387 | 34252 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_46135 | k141_46135_21 | 34333 | 36510 | - | GH92 |
Gene ID: k141_46135_6
Type: TC
Location: 5348 - 6340 (-)
Type: TC
Location: 5348 - 6340 (-)
Gene ID: k141_46135_7
Type: CAZyme
Location: 6535 - 7695 (-)
Type: CAZyme
Location: 6535 - 7695 (-)
Gene ID: k141_46135_8
Type: CAZyme
Location: 7759 - 10623 (-)
Type: CAZyme
Location: 7759 - 10623 (-)
Gene ID: k141_46135_9
Type: pfam
Location: 10644 - 11975 (-)
Type: pfam
Location: 10644 - 11975 (-)
Gene ID: k141_46135_10
Type: pfam
Location: 12005 - 13744 (-)
Type: pfam
Location: 12005 - 13744 (-)
Gene ID: k141_46135_11
Type: TC
Location: 13760 - 16579 (-)
Type: TC
Location: 13760 - 16579 (-)
Gene ID: k141_46135_12
Type: pfam
Location: 16615 - 18351 (-)
Type: pfam
Location: 16615 - 18351 (-)
Gene ID: k141_46135_13
Type: TC
Location: 18364 - 21570 (-)
Type: TC
Location: 18364 - 21570 (-)
Gene ID: k141_46135_14
Type: CAZyme
Location: 21575 - 23116 (-)
Type: CAZyme
Location: 21575 - 23116 (-)
Gene ID: k141_46135_15
Type: CAZyme
Location: 23137 - 25089 (-)
Type: CAZyme
Location: 23137 - 25089 (-)
Gene ID: k141_46135_16
Type: CAZyme
Location: 25110 - 27317 (-)
Type: CAZyme
Location: 25110 - 27317 (-)
Gene ID: k141_46135_17
Type: CAZyme
Location: 27342 - 28865 (-)
Type: CAZyme
Location: 27342 - 28865 (-)
Gene ID: k141_46135_18
Type: CAZyme
Location: 28922 - 30895 (-)
Type: CAZyme
Location: 28922 - 30895 (-)
Gene ID: k141_46135_19
Type: CAZyme
Location: 30936 - 32297 (-)
Type: CAZyme
Location: 30936 - 32297 (-)
Gene ID: k141_46135_20
Type:
Location: 32387 - 34252 (-)
Type:
Location: 32387 - 34252 (-)
Gene ID: k141_46135_21
Type: CAZyme
Location: 34333 - 36510 (-)
Type: CAZyme
Location: 34333 - 36510 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.