Cluster: CGMR001000_CGC65
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_01831
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19232 | k141_19232_2 | 268 | 2934 | - | CBM35 |
| pfam | k141_19232 | k141_19232_3 | 3116 | 4240 | - | Por_Secre_tail |
| CAZyme | k141_19232 | k141_19232_4 | 4294 | 7482 | - | GH66 |
| TC | k141_19232 | k141_19232_5 | 7500 | 9032 | - | 8.A.46.1.3 |
| TC | k141_19232 | k141_19232_6 | 9045 | 12170 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_19232 | k141_19232_7 | 12225 | 12320 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_19232 | k141_19232_8 | 12368 | 13798 | - | 2.A.1.1.66 |
Gene ID: k141_19232_2
Type: CAZyme
Location: 268 - 2934 (-)
Type: CAZyme
Location: 268 - 2934 (-)
Gene ID: k141_19232_3
Type: pfam
Location: 3116 - 4240 (-)
Type: pfam
Location: 3116 - 4240 (-)
Gene ID: k141_19232_4
Type: CAZyme
Location: 4294 - 7482 (-)
Type: CAZyme
Location: 4294 - 7482 (-)
Gene ID: k141_19232_5
Type: TC
Location: 7500 - 9032 (-)
Type: TC
Location: 7500 - 9032 (-)
Gene ID: k141_19232_6
Type: TC
Location: 9045 - 12170 (-)
Type: TC
Location: 9045 - 12170 (-)
Gene ID: k141_19232_7
Type:
Location: 12225 - 12320 (-)
Type:
Location: 12225 - 12320 (-)
Gene ID: k141_19232_8
Type: TC
Location: 12368 - 13798 (-)
Type: TC
Location: 12368 - 13798 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_19232_7 | vegan > omnivore | 2.20220 | 0.02513 |