Cluster: CGMR001000_CGC64
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_08084
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_27990 | k141_27990_17 | 16899 | 18065 | + | 1.A.23.4.5 |
| TF | k141_27990 | k141_27990_18 | 18062 | 22003 | - | HTH_AraC |
| sulfatase | k141_27990 | k141_27990_19 | 22070 | 23521 | - | S1_20 |
| CAZyme | k141_27990 | k141_27990_20 | 23737 | 26181 | + | GH95 |
| pfam | k141_27990 | k141_27990_21 | 26266 | 27318 | - | DeoC |
| pfam | k141_27990 | k141_27990_22 | 27373 | 28119 | - | His_Phos_1 | His_Phos_1 |
| TC | k141_27990 | k141_27990_23 | 28672 | 30126 | - | 3.A.1.131.2 |
| CAZyme | k141_27990 | k141_27990_24 | 30132 | 32129 | - | GH13_14 |
Gene ID: k141_27990_17
Type: TC
Location: 16899 - 18065 (+)
Type: TC
Location: 16899 - 18065 (+)
Gene ID: k141_27990_18
Type: TF
Location: 18062 - 22003 (-)
Type: TF
Location: 18062 - 22003 (-)
Gene ID: k141_27990_19
Type: sulfatase
Location: 22070 - 23521 (-)
Type: sulfatase
Location: 22070 - 23521 (-)
Gene ID: k141_27990_20
Type: CAZyme
Location: 23737 - 26181 (+)
Type: CAZyme
Location: 23737 - 26181 (+)
Gene ID: k141_27990_21
Type: pfam
Location: 26266 - 27318 (-)
Type: pfam
Location: 26266 - 27318 (-)
Gene ID: k141_27990_22
Type: pfam
Location: 27373 - 28119 (-)
Type: pfam
Location: 27373 - 28119 (-)
Gene ID: k141_27990_23
Type: TC
Location: 28672 - 30126 (-)
Type: TC
Location: 28672 - 30126 (-)
Gene ID: k141_27990_24
Type: CAZyme
Location: 30132 - 32129 (-)
Type: CAZyme
Location: 30132 - 32129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.