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Cluster: CGMR001000_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43723 k141_43723_7 5728 7794 - GH20
CAZyme k141_43723 k141_43723_8 8114 10363 - GH92
NULL(UNKNOWN) k141_43723 k141_43723_9 10368 10502 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_43723 k141_43723_10 10499 11470 - GH130_2
pfam k141_43723 k141_43723_11 11672 12976 - MFS_1 | MFS_1
CAZyme k141_43723 k141_43723_12 13085 15607 - GH2
CAZyme k141_43723 k141_43723_13 15823 18198 + GH20
NULL(UNKNOWN) k141_43723 k141_43723_14 18213 18308 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_43723 k141_43723_15 18414 19595 - GH33
CAZyme k141_43723 k141_43723_16 19727 22792 - GH85
TC k141_43723 k141_43723_17 22875 24641 - 8.A.46.2.2
TC k141_43723 k141_43723_18 24670 28230 - 1.B.14.6.13
Gene ID: k141_43723_7
Type: CAZyme
Location: 5728 - 7794 (-)
Gene ID: k141_43723_8
Type: CAZyme
Location: 8114 - 10363 (-)
Gene ID: k141_43723_9
Type:
Location: 10368 - 10502 (-)
Gene ID: k141_43723_10
Type: CAZyme
Location: 10499 - 11470 (-)
Gene ID: k141_43723_11
Type: pfam
Location: 11672 - 12976 (-)
Gene ID: k141_43723_12
Type: CAZyme
Location: 13085 - 15607 (-)
Gene ID: k141_43723_13
Type: CAZyme
Location: 15823 - 18198 (+)
Gene ID: k141_43723_14
Type:
Location: 18213 - 18308 (-)
Gene ID: k141_43723_15
Type: CAZyme
Location: 18414 - 19595 (-)
Gene ID: k141_43723_16
Type: CAZyme
Location: 19727 - 22792 (-)
Gene ID: k141_43723_17
Type: TC
Location: 22875 - 24641 (-)
Gene ID: k141_43723_18
Type: TC
Location: 24670 - 28230 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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