Cluster: CGMR001000_CGC31
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR001000
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_35464 | k141_35464_10 | 12512 | 14686 | + | GH89 |
| pfam | k141_35464 | k141_35464_11 | 14745 | 15899 | + | Gly_kinase |
| TC | k141_35464 | k141_35464_12 | 15915 | 17162 | + | 2.A.8.1.9 |
| pfam | k141_35464 | k141_35464_13 | 17199 | 18284 | + | HGSNAT_cat |
| CAZyme | k141_35464 | k141_35464_14 | 18290 | 20473 | + | GH89 |
| sulfatase | k141_35464 | k141_35464_15 | 20566 | 22098 | + | S1_46 |
| NULL(UNKNOWN) | k141_35464 | k141_35464_16 | 22438 | 22590 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_35464 | k141_35464_17 | 22902 | 23915 | + | GH130_5 |
| TC | k141_35464 | k141_35464_18 | 23940 | 25583 | + | 2.A.21.3.1 |
| CAZyme | k141_35464 | k141_35464_19 | 25609 | 27600 | + | GH2 |
| NULL(UNKNOWN) | k141_35464 | k141_35464_20 | 27604 | 28842 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_35464 | k141_35464_21 | 28855 | 31101 | + | GH3 |
| TF | k141_35464 | k141_35464_22 | 31193 | 32056 | - | HTH_AraC |
| sulfatase | k141_35464 | k141_35464_23 | 32311 | 34122 | + | S1_36 |
| CAZyme | k141_35464 | k141_35464_24 | 34135 | 36066 | + | CE20 | CE20 |
| NULL(UNKNOWN) | k141_35464 | k141_35464_25 | 36517 | 37713 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_35464 | k141_35464_26 | 37846 | 39270 | + | Beta_helix |
| CAZyme | k141_35464 | k141_35464_27 | 39341 | 41644 | + | PL35 |
| TC | k141_35464 | k141_35464_28 | 41689 | 44829 | + | 1.B.14.6.1 |
Gene ID: k141_35464_10
Type: CAZyme
Location: 12512 - 14686 (+)
Type: CAZyme
Location: 12512 - 14686 (+)
Gene ID: k141_35464_11
Type: pfam
Location: 14745 - 15899 (+)
Type: pfam
Location: 14745 - 15899 (+)
Gene ID: k141_35464_12
Type: TC
Location: 15915 - 17162 (+)
Type: TC
Location: 15915 - 17162 (+)
Gene ID: k141_35464_13
Type: pfam
Location: 17199 - 18284 (+)
Type: pfam
Location: 17199 - 18284 (+)
Gene ID: k141_35464_14
Type: CAZyme
Location: 18290 - 20473 (+)
Type: CAZyme
Location: 18290 - 20473 (+)
Gene ID: k141_35464_15
Type: sulfatase
Location: 20566 - 22098 (+)
Type: sulfatase
Location: 20566 - 22098 (+)
Gene ID: k141_35464_16
Type:
Location: 22438 - 22590 (-)
Type:
Location: 22438 - 22590 (-)
Gene ID: k141_35464_17
Type: CAZyme
Location: 22902 - 23915 (+)
Type: CAZyme
Location: 22902 - 23915 (+)
Gene ID: k141_35464_18
Type: TC
Location: 23940 - 25583 (+)
Type: TC
Location: 23940 - 25583 (+)
Gene ID: k141_35464_19
Type: CAZyme
Location: 25609 - 27600 (+)
Type: CAZyme
Location: 25609 - 27600 (+)
Gene ID: k141_35464_20
Type:
Location: 27604 - 28842 (+)
Type:
Location: 27604 - 28842 (+)
Gene ID: k141_35464_21
Type: CAZyme
Location: 28855 - 31101 (+)
Type: CAZyme
Location: 28855 - 31101 (+)
Gene ID: k141_35464_22
Type: TF
Location: 31193 - 32056 (-)
Type: TF
Location: 31193 - 32056 (-)
Gene ID: k141_35464_23
Type: sulfatase
Location: 32311 - 34122 (+)
Type: sulfatase
Location: 32311 - 34122 (+)
Gene ID: k141_35464_24
Type: CAZyme
Location: 34135 - 36066 (+)
Type: CAZyme
Location: 34135 - 36066 (+)
Gene ID: k141_35464_25
Type:
Location: 36517 - 37713 (+)
Type:
Location: 36517 - 37713 (+)
Gene ID: k141_35464_26
Type: pfam
Location: 37846 - 39270 (+)
Type: pfam
Location: 37846 - 39270 (+)
Gene ID: k141_35464_27
Type: CAZyme
Location: 39341 - 41644 (+)
Type: CAZyme
Location: 39341 - 41644 (+)
Gene ID: k141_35464_28
Type: TC
Location: 41689 - 44829 (+)
Type: TC
Location: 41689 - 44829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.