Cluster: CGMR001000_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001000
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_32251 | k141_32251_25 | 28668 | 29831 | - | GH171 |
| STP | k141_32251 | k141_32251_26 | 29906 | 30442 | + | HD |
| TC | k141_32251 | k141_32251_27 | 30531 | 33242 | + | 1.B.42.1.8 |
| pfam | k141_32251 | k141_32251_28 | 33351 | 35735 | - | CARDB | Por_Secre_tail |
| NULL(UNKNOWN) | k141_32251 | k141_32251_29 | 35769 | 36635 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_32251 | k141_32251_30 | 36661 | 38157 | - | 8.A.46.3.2 |
| TC | k141_32251 | k141_32251_31 | 38172 | 41150 | - | 1.B.14.6.1 |
Gene ID: k141_32251_25
Type: CAZyme
Location: 28668 - 29831 (-)
Type: CAZyme
Location: 28668 - 29831 (-)
Gene ID: k141_32251_26
Type: STP
Location: 29906 - 30442 (+)
Type: STP
Location: 29906 - 30442 (+)
Gene ID: k141_32251_27
Type: TC
Location: 30531 - 33242 (+)
Type: TC
Location: 30531 - 33242 (+)
Gene ID: k141_32251_28
Type: pfam
Location: 33351 - 35735 (-)
Type: pfam
Location: 33351 - 35735 (-)
Gene ID: k141_32251_29
Type:
Location: 35769 - 36635 (-)
Type:
Location: 35769 - 36635 (-)
Gene ID: k141_32251_30
Type: TC
Location: 36661 - 38157 (-)
Type: TC
Location: 36661 - 38157 (-)
Gene ID: k141_32251_31
Type: TC
Location: 38172 - 41150 (-)
Type: TC
Location: 38172 - 41150 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.