Cluster: CGMR001000_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_00547
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16126 | k141_16126_9 | 4951 | 7356 | + | 1.B.14.6.7 |
| STP | k141_16126 | k141_16126_10 | 7462 | 7866 | + | Glyoxalase |
| TC | k141_16126 | k141_16126_11 | 7993 | 9546 | + | 3.B.1.1.2 |
| pfam | k141_16126 | k141_16126_12 | 9566 | 10480 | + | LTD | OAD_gamma |
| TC | k141_16126 | k141_16126_13 | 10506 | 10949 | + | 3.B.1.1.2 |
| TC | k141_16126 | k141_16126_14 | 10952 | 12112 | + | 3.B.1.1.2 |
| CAZyme | k141_16126 | k141_16126_15 | 12318 | 14168 | + | GH13_46 |
Gene ID: k141_16126_9
Type: TC
Location: 4951 - 7356 (+)
Type: TC
Location: 4951 - 7356 (+)
Gene ID: k141_16126_10
Type: STP
Location: 7462 - 7866 (+)
Type: STP
Location: 7462 - 7866 (+)
Gene ID: k141_16126_11
Type: TC
Location: 7993 - 9546 (+)
Type: TC
Location: 7993 - 9546 (+)
Gene ID: k141_16126_12
Type: pfam
Location: 9566 - 10480 (+)
Type: pfam
Location: 9566 - 10480 (+)
Gene ID: k141_16126_13
Type: TC
Location: 10506 - 10949 (+)
Type: TC
Location: 10506 - 10949 (+)
Gene ID: k141_16126_14
Type: TC
Location: 10952 - 12112 (+)
Type: TC
Location: 10952 - 12112 (+)
Gene ID: k141_16126_15
Type: CAZyme
Location: 12318 - 14168 (+)
Type: CAZyme
Location: 12318 - 14168 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.