Cluster: CGMR001000_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_01552
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_49708 | k141_49708_10 | 10129 | 11160 | - | 8.A.5.1.6 |
| TC | k141_49708 | k141_49708_11 | 11434 | 13005 | + | 2.A.49.6.1 |
| NULL(UNKNOWN) | k141_49708 | k141_49708_12 | 13131 | 13814 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_49708 | k141_49708_13 | 14236 | 15078 | - | AP_endonuc_2 |
| CAZyme | k141_49708 | k141_49708_14 | 15286 | 17925 | - | PL15_2 |
| TC | k141_49708 | k141_49708_15 | 18015 | 19259 | - | 2.A.1.7.18 |
Gene ID: k141_49708_10
Type: TC
Location: 10129 - 11160 (-)
Type: TC
Location: 10129 - 11160 (-)
Gene ID: k141_49708_11
Type: TC
Location: 11434 - 13005 (+)
Type: TC
Location: 11434 - 13005 (+)
Gene ID: k141_49708_12
Type:
Location: 13131 - 13814 (+)
Type:
Location: 13131 - 13814 (+)
Gene ID: k141_49708_13
Type: pfam
Location: 14236 - 15078 (-)
Type: pfam
Location: 14236 - 15078 (-)
Gene ID: k141_49708_14
Type: CAZyme
Location: 15286 - 17925 (-)
Type: CAZyme
Location: 15286 - 17925 (-)
Gene ID: k141_49708_15
Type: TC
Location: 18015 - 19259 (-)
Type: TC
Location: 18015 - 19259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.