Cluster: C89.bin_3_CGC60
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C89_contig_31 | C89_contig_31_578 | 734958 | 736868 | + | 1.B.42.1.13 |
| pfam | C89_contig_31 | C89_contig_31_579 | 736873 | 738087 | + | GTP_cyclohydro2 | DHBP_synthase |
| STP | C89_contig_31 | C89_contig_31_580 | 738170 | 739363 | + | Aminotran_1_2 |
| CAZyme | C89_contig_31 | C89_contig_31_581 | 739493 | 742228 | + | CBM67 | GH78 |
Gene ID: C89_contig_31_578
Type: TC
Location: 734958 - 736868 (+)
Type: TC
Location: 734958 - 736868 (+)
Gene ID: C89_contig_31_579
Type: pfam
Location: 736873 - 738087 (+)
Type: pfam
Location: 736873 - 738087 (+)
Gene ID: C89_contig_31_580
Type: STP
Location: 738170 - 739363 (+)
Type: STP
Location: 738170 - 739363 (+)
Gene ID: C89_contig_31_581
Type: CAZyme
Location: 739493 - 742228 (+)
Type: CAZyme
Location: 739493 - 742228 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C89_contig_31_578 | vegan > omnivore | 1.10141 | 0.00500 |