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Cluster: C89.bin_3_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C89_contig_14 C89_contig_14_299 394162 395811 + GH20
sulfatase C89_contig_14 C89_contig_14_300 395934 397400 - S1_20
sulfatase C89_contig_14 C89_contig_14_301 397812 399398 + S1_11
CAZyme C89_contig_14 C89_contig_14_302 399443 401758 + GH20
CAZyme C89_contig_14 C89_contig_14_303 401836 404898 + GH2
CAZyme C89_contig_14 C89_contig_14_304 404948 406765 + GH29
pfam C89_contig_14 C89_contig_14_305 406831 407487 + TAL_FSA
TC C89_contig_14 C89_contig_14_306 407626 408795 + 1.A.23.4.5
Gene ID: C89_contig_14_299
Type: CAZyme
Location: 394162 - 395811 (+)
Gene ID: C89_contig_14_300
Type: sulfatase
Location: 395934 - 397400 (-)
Gene ID: C89_contig_14_301
Type: sulfatase
Location: 397812 - 399398 (+)
Gene ID: C89_contig_14_302
Type: CAZyme
Location: 399443 - 401758 (+)
Gene ID: C89_contig_14_303
Type: CAZyme
Location: 401836 - 404898 (+)
Gene ID: C89_contig_14_304
Type: CAZyme
Location: 404948 - 406765 (+)
Gene ID: C89_contig_14_305
Type: pfam
Location: 406831 - 407487 (+)
Gene ID: C89_contig_14_306
Type: TC
Location: 407626 - 408795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C89_contig_14_299 vegan > omnivore 1.08954 0.00500

🧭 Explore Read Mapping of CGC

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