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Cluster: C89.bin_3_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C89_contig_14 C89_contig_14_287 372276 374270 + GH13_14
TF C89_contig_14 C89_contig_14_288 374511 375071 + GerE
STP C89_contig_14 C89_contig_14_289 375161 376159 + FecR
TC C89_contig_14 C89_contig_14_290 376297 379734 + 1.B.14.6.1
pfam C89_contig_14 C89_contig_14_291 379749 381614 + SusD_RagB | SusD-like_3
CAZyme C89_contig_14 C89_contig_14_292 381715 383271 + GH20
sulfatase C89_contig_14 C89_contig_14_293 383287 384801 + S1_20
TC C89_contig_14 C89_contig_14_294 384943 386397 + 3.A.1.131.2
CAZyme C89_contig_14 C89_contig_14_295 386540 388882 - GH141
Gene ID: C89_contig_14_287
Type: CAZyme
Location: 372276 - 374270 (+)
Gene ID: C89_contig_14_288
Type: TF
Location: 374511 - 375071 (+)
Gene ID: C89_contig_14_289
Type: STP
Location: 375161 - 376159 (+)
Gene ID: C89_contig_14_290
Type: TC
Location: 376297 - 379734 (+)
Gene ID: C89_contig_14_291
Type: pfam
Location: 379749 - 381614 (+)
Gene ID: C89_contig_14_292
Type: CAZyme
Location: 381715 - 383271 (+)
Gene ID: C89_contig_14_293
Type: sulfatase
Location: 383287 - 384801 (+)
Gene ID: C89_contig_14_294
Type: TC
Location: 384943 - 386397 (+)
Gene ID: C89_contig_14_295
Type: CAZyme
Location: 386540 - 388882 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C89_contig_14_294 vegan > omnivore 1.36725 0.00500

🧭 Explore Read Mapping of CGC

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