Cluster: C59.CMAG_1_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C59.CMAG_1
- CGC Family ID: CGCFAM_00156
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C59_contig_2388 | C59_contig_2388_626 | 726498 | 727547 | + | GT2 |
| NULL(UNKNOWN) | C59_contig_2388 | C59_contig_2388_627 | 727746 | 728747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C59_contig_2388 | C59_contig_2388_628 | 728825 | 729964 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C59_contig_2388 | C59_contig_2388_629 | 730090 | 731769 | - | 3.A.1.120.6 |
Gene ID: C59_contig_2388_626
Type: CAZyme
Location: 726498 - 727547 (+)
Type: CAZyme
Location: 726498 - 727547 (+)
Gene ID: C59_contig_2388_627
Type:
Location: 727746 - 728747 (+)
Type:
Location: 727746 - 728747 (+)
Gene ID: C59_contig_2388_628
Type:
Location: 728825 - 729964 (+)
Type:
Location: 728825 - 729964 (+)
Gene ID: C59_contig_2388_629
Type: TC
Location: 730090 - 731769 (-)
Type: TC
Location: 730090 - 731769 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.