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Cluster: C59.CMAG_1_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C59_contig_2388 C59_contig_2388_504 584581 585261 + 3.A.1.125.3
pfam C59_contig_2388 C59_contig_2388_505 585263 588430 + FtsX | FtsX
pfam C59_contig_2388 C59_contig_2388_506 588527 589978 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC C59_contig_2388 C59_contig_2388_507 589979 590911 + 3.A.1.122.2
TC C59_contig_2388 C59_contig_2388_508 590908 592143 + 3.A.1.122.2
TC C59_contig_2388 C59_contig_2388_509 592765 594540 - 3.A.1.5.23
TC C59_contig_2388 C59_contig_2388_510 594549 595460 - 3.A.1.5.2
TC C59_contig_2388 C59_contig_2388_511 595450 596436 - 3.A.1.5.20
TC C59_contig_2388 C59_contig_2388_512 596439 598067 - 3.A.1.5.3
STP C59_contig_2388 C59_contig_2388_513 598174 599607 - HD
STP C59_contig_2388 C59_contig_2388_514 599828 600760 - PfkB
TC C59_contig_2388 C59_contig_2388_515 600914 602617 - 8.A.7.1.1
STP C59_contig_2388 C59_contig_2388_516 602753 603016 - PTS-HPr
CAZyme C59_contig_2388 C59_contig_2388_517 603449 604960 + GT83
CAZyme C59_contig_2388 C59_contig_2388_518 605108 606151 - GT2
CAZyme C59_contig_2388 C59_contig_2388_519 606148 607299 - GT2
pfam C59_contig_2388 C59_contig_2388_520 607364 608401 - Acyl_transf_3
CAZyme C59_contig_2388 C59_contig_2388_521 608463 610412 - GH73
Gene ID: C59_contig_2388_504
Type: TC
Location: 584581 - 585261 (+)
Gene ID: C59_contig_2388_505
Type: pfam
Location: 585263 - 588430 (+)
Gene ID: C59_contig_2388_506
Type: pfam
Location: 588527 - 589978 (+)
Gene ID: C59_contig_2388_507
Type: TC
Location: 589979 - 590911 (+)
Gene ID: C59_contig_2388_508
Type: TC
Location: 590908 - 592143 (+)
Gene ID: C59_contig_2388_509
Type: TC
Location: 592765 - 594540 (-)
Gene ID: C59_contig_2388_510
Type: TC
Location: 594549 - 595460 (-)
Gene ID: C59_contig_2388_511
Type: TC
Location: 595450 - 596436 (-)
Gene ID: C59_contig_2388_512
Type: TC
Location: 596439 - 598067 (-)
Gene ID: C59_contig_2388_513
Type: STP
Location: 598174 - 599607 (-)
Gene ID: C59_contig_2388_514
Type: STP
Location: 599828 - 600760 (-)
Gene ID: C59_contig_2388_515
Type: TC
Location: 600914 - 602617 (-)
Gene ID: C59_contig_2388_516
Type: STP
Location: 602753 - 603016 (-)
Gene ID: C59_contig_2388_517
Type: CAZyme
Location: 603449 - 604960 (+)
Gene ID: C59_contig_2388_518
Type: CAZyme
Location: 605108 - 606151 (-)
Gene ID: C59_contig_2388_519
Type: CAZyme
Location: 606148 - 607299 (-)
Gene ID: C59_contig_2388_520
Type: pfam
Location: 607364 - 608401 (-)
Gene ID: C59_contig_2388_521
Type: CAZyme
Location: 608463 - 610412 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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