Cluster: C59.CMAG_1_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C59.CMAG_1
- CGC Family ID: CGCFAM_08031
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C59_contig_2388 | C59_contig_2388_228 | 279372 | 281075 | + | 3.A.1.8.1 |
| TC | C59_contig_2388 | C59_contig_2388_229 | 281072 | 282178 | + | 3.A.1.19.5 |
| CAZyme | C59_contig_2388 | C59_contig_2388_230 | 282378 | 285674 | + | GH33 |
Gene ID: C59_contig_2388_228
Type: TC
Location: 279372 - 281075 (+)
Type: TC
Location: 279372 - 281075 (+)
Gene ID: C59_contig_2388_229
Type: TC
Location: 281072 - 282178 (+)
Type: TC
Location: 281072 - 282178 (+)
Gene ID: C59_contig_2388_230
Type: CAZyme
Location: 282378 - 285674 (+)
Type: CAZyme
Location: 282378 - 285674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.